Newer
Older
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
#!/bin/bash
#######################
# University of Wisconsin Madison, Space Science Engineering Center (SSEC)
#file_Date = '$Date: 2016-07-05 15:12:24 -0400 (Tue, 05 Jul 2016) $'
#file_Revision = '$Revision: 775 $'
#file_Author = '$Author: scottm $'
#file_HeadURL = '$HeadURL: https://svn.ssec.wisc.edu/repos/jpss_adl_distribution/trunk/httpsFiles/SSEC-Support/ADL_BLOCK_2/scripts/adl_cots_install.sh $'
#file_Id = '$Id: adl_cots_install.sh 775 2016-07-05 19:12:24Z scottm $'
#######################
# University of Wisconsin Madison, Space Science Engineering Center (SSEC)
# script to install ADL cots from server at UW-Madison
#ADL_COTS/adl_cots.sh wipe all 2>&1 | tee ADL_COTS/java.log
gcc --version
# gcc netos6 Comment these out for buildbucket
export CC="gcc"
export CPP="cpp"
export CXX="g++"
export FORTRAN="gfortran"
export FC="gfortran"
# gcc netos6 Comment above out for buildbucket
#CC, FC, CXX, F90, F77, F9X
#LINUXCPUFLAGS="-msse4a -fPIC"
#gcc buildbucket
export FORTRAN=${FC}
export F77=${FORTRAN}
export FC=${FORTRAN}
export LOADER=${FORTRAN}
export F77_COMPILER=${FORTRAN}
export F90_COMPILER=${FORTRAN}
export F95_COMPILER=${FORTRAN}
export CPP_COMPILER=${FORTRAN}
export FFLAGS=" -O3 -msse4a -fPIC -Wall -funderscoring -x f77"
###"-msse4a -msse4a LINUXCPUFLAGS="-march=ivybridge"
echo "CPPFLAGS" $CPPFLAGS
echo "CPATH" $CPATH
export F77_FLAGS=${FFLAGS}
export CFLAGS=" -msse4a -g -O3 -fPIC -Wall -Wno-unknown-pragmas -Wunused-variable -Wunused-but-set-parameter "
export CPPFLAGS=" -msse4a -g -O3 -fPIC -Wall -Wno-unknown-pragmas -Wunused-variable -fpermissive -Wunused-but-set-parameter "
export CXXFLAGS=$CPPFLAGS
echo "CPPFLAGS" $CPPFLAGS
echo "CPATH" $CPATH
COTS_HOME=/csppbinaries/cspp-sdr-binary/distro/
COTSBASE=/CSPP_SDR_4_0
mkdir -p ${COTSBASE}
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
echo $COTSBASE
echo $COTS_HOME
shift 2
echo $@
export ADL_COTS=${COTS_HOME}/tars
export USER_COTS_PATH=${COTSBASE}/local
export BUILD=${COTSBASE}/build
echo "LD_RUN_PATH" $LD_RUN_PATH
echo "LD_LIBRARY_PATH" $LD_LIBRARY_PATH
echo "PATH" $PATH
export LD_LIBRARY_PATH=${USER_COTS_PATH}/lib64:${USER_COTS_PATH}/lib:${LD_LIBRARY_PATH}
export LD_RUN_PATH=${USER_COTS_PATH}/lib64:${USER_COTS_PATH}/lib:${LD_RUN_PATH}
export PATH=${USER_COTS_PATH}/bin:$PATH
install_the_source (){
echo ${FUNCNAME[0]}
# This will download and unpack the requested COT. If the cot is already present it will not be downloaded.
tar_name=$1
destination=${BUILD}"/"
echo "install " ${tar_name} "to "${destination}
if [ -e ${ADL_COTS}/${tar_name} ] ;
then
cd ${BUILD}
tar -xf ${ADL_COTS}/${tar_name}
if [ $? == "0" ] ;
then
echo "Package unpacked: " ${tar_name}
return 0
else
unzip ${ADL_COTS}/${tar_name}
return 0
fi
else
echo "No source " ${ADL_COTS}/${tar_name}
fi
return 1
}
echo_var()
{
var=${1}
echo $1
echo "$1="${${var}}
}
echo_vars()
{
echo_var "COTS_HOME"
echo_var "DOWNLOAD"
echo_var "BUILD"
echo_var "USER_COTS_PATH"
echo_var "CC"
echo_var "CPP"
echo_var "CXX"
echo_var "FORTRAN"
echo_var "F77"
echo_var "FC"
echo_var "LOADER"
echo_var "F77_COMPILER"
echo_var "F90_COMPILER"
echo_var "F95_COMPILER"
echo_var "CPP_COMPILER"
echo_var "FFLAGS"
echo_var "F77_FLAGS"
echo_var "LD_RUN_PATH"
echo_var "LD_LIBRARY_PATH"
gcc -version
gfortran --version
}
chk_installed()
{
echo ${FUNCNAME[0]}
exit_now=0
echo "Variables"
which ${CC}
which ${CPP}
which ${CXX}
which gcc
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo "sudo yum install gcc.x86_64"
exit_now=1
fi
which g++
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo "sudo yum install gcc-c++.x86_64"
exit_now=1
fi
which gfortran
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo "sudo yum install gcc-gfortran.x86_64"
exit_now=1
fi
X11=`find / -mount -name Xlib.h 2>&-`
if [ -z ${X11} ];
then
echo "Possible installation command"
echo "sudo yum install libXt-devel.x86_64"
fi
X11=`find / -mount -iname expat-dev* 2>&-`
if [ -z ${X11} ];
then
echo "Possible installation command"
echo "sudo yum install expat-devel.x86_64"
fi
which bison
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo "sudo yum install bison.x86_64"
exit_now=1
fi
which jar
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo "sudo yum install java-1.8.0-openjdk-devel.x86_64 "
exit_now=1
fi
which ksh
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo "sudo yum install sudo yum install ksh.x86_64"
exit_now=1
fi
which imake
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo " sudo yum install imake.x86_64"
exit_now=1
fi
which tclsh
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo " sudo yum install tcl-devel.x86_64"
exit_now=1
fi
which perl
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo "perl must be at least 5.10.1"
perl -v
#2>&1 | grep "version"
fi
which cpan
if [ $? -eq 1 ] ;
then
echo "Possible installation command"
echo "sudo yum install perl-CPAN.x86_64"
fi
modules="File::Basename Getopt::Std Data::Dumper FileHandle Exporter XML::Simple "
exit_now=0
for mod in ${modules} ;
do
perl -M${mod} -e 1 &> perl.log
if [ $? != 0 ] ;
then
echo "Possible installation command"
echo "sudo cpan -f ${mod} "
exit_now=1
else
echo 'Module: ' ${mod} 'present'
fi
done
if [ ${exit_now} -ne 0 ] ;
then
echo "Missing perl COTS listed above"
echo "Suggested commands listed"
exit 1
fi
boost_libs=`find /usr -iname *libboost*`
if [ ! -z "${boost_libs}" ] ;
then
echo "Warning parts of Boost already installed"
fi
}
mk_libtool()
{
echo ${FUNCNAME[0]}
tar_name=libtool-2.4.6.tar.gz && \
rm -fr ${BUILD}/libtool* && \
install_the_source ${tar_name} && \
cd ${BUILD}/libtool* && \
./configure --prefix=${USER_COTS_PATH} && \
make && \
make install && \
echo "${FUNCNAME[0]} finished"
}
mk_xerces() {
echo ${FUNCNAME[0]}
tar_name=xerces-c-3.2.3.tar.gz && \
install_the_source ${tar_name} && \
cd ${BUILD}/xerces-c-3.2.3 && \
./configure --enable-static --enable-shared --prefix=${USER_COTS_PATH} && \
make && \
make install && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_png() {
echo ${FUNCNAME[0]}
tar_name=libpng-1.6.37.tar.gz && \
install_the_source ${tar_name} && \
cd ${BUILD}/libpng* && \
./configure --prefix=${USER_COTS_PATH} && \
make && \
make install && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_zlib() {
echo ${FUNCNAME[0]}
tar_name=zlib-1.2.7.tar.gz && \
install_the_source ${tar_name} && \
cd ${BUILD}/zlib* && \
./configure --prefix=${USER_COTS_PATH} && \
make && \
make install && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_bz2() {
echo ${FUNCNAME[0]}
tar_name=bzip2-1.0.6.tar.gz && /
install_the_source ${tar_name} && /
cd ${BUILD}/bz* && /
make clean && /
make install PREFIX=${USER_COTS_PATH} CFLAGS=" ${CFLAGS} -Winline -D_FILE_OFFSET_BITS=64" CC="${CC}" && \
rm bzless; ln -sr bzmore bzless && /
rm bzegrep; ln -sr bzgrep bzegrep && /
rm bzfgrep; ln -sr bzgrep bzfgrep && /
echo "${FUNCNAME[0]} finished" && \
return 0
}
# -D_GLIBCXX_USE_CXX11_ABI=0
mk_boost(){
echo ${FUNCNAME[0]}
tar_name=boost_1_57_0.tar.gz && \
rm -fr ${USER_COTS_PATH}/lib/*boost* && \
rm -fr ${USER_COTS_PATH}/include/boost && \
install_the_source ${tar_name} && \
cd ${BUILD}/boost* && \
./bootstrap.sh --help
./bootstrap.sh --with-toolset=gcc --with-libraries="filesystem","iostreams","regex","thread","serialization","system" --prefix="${USER_COTS_PATH}" && \
./b2 --help-options
./b2 install toolset=gcc -q --build-dir=tmp --debug-configuration -d+2 --prefix="${USER_COTS_PATH}" linkflags="-L${USER_COTS_PATH}/lib" cxxflags="${CXXFLAGS} -Wunused-but-set-parameter " && \
#./b2 install --debug-configuration -d+2 --prefix="'${USER_COTS_PATH}'" --build-dir=tmp/build-boost optimization=speed linkflags="-L${USER_COTS_PATH}/lib" cxxflags="'${CXXFLAGS}' " && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_wgrib2() {
echo ${FUNCNAME[0]}
tar_name=wgrib2.v2.0.2.tgz && \
rm -fr ${BUILD}/grib2 && \
install_the_source ${tar_name} && \
cd ${BUILD}/g* && \
# do this twice
make USE_G2CLIB=1 && \
cp -f ./g2clib-1.4.0/libgrib2c.a ${USER_COTS_PATH}/lib && \
cp -f --preserve=links ./libpng*/.libs/* ${USER_COTS_PATH}/lib && \
cp -f --preserve=links ./jasp*/src/libjasper/.libs/* ${USER_COTS_PATH}/lib && \
cp -f ./g2clib-1.4.0/grib2.h ${USER_COTS_PATH}/include && \
cp ${BUILD}/grib2/wgrib2/wgrib2 ${USER_COTS_PATH}/bin && \
#ln -fs ${USER_COTS_PATH}/lib ${USER_COTS_PATH}/g2clib-1.4.0 && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_hdf5() {
echo ${FUNCNAME[0]}
gcc --version
tar_name=hdf5-1.10.4.tar.gz && \
install_the_source ${tar_name} && \
cd ${BUILD}/hdf* && \
./configure --enable-static=yes --enable-shared=yes --with-zlib=${USER_COTS_PATH} --with-slib=${USER_COTS_PATH} --with-szlib=${USER_COTS_PATH} --prefix=${USER_COTS_PATH} CPPFLAGS="${CPPFLAGS}" CXXFLAGS="${CXXFLAGS}" CPATH="${CPATH}" C_INCLUDE="${C_INCLUDE}" CFLAGS="${CFLALGS}"
CC="${CC}" && \
make clean && \
make -j 3 && \
make install && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_log4cplus() {
echo ${FUNCNAME[0]}
tar_name=log4cplus-1.0.4.3.tar.gz && \
install_the_source ${tar_name} && \
cd ${BUILD}/log4c* && \
./configure --prefix=${USER_COTS_PATH} && \
make && \
make install && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_szip()
{
echo ${FUNCNAME[0]}
tar_name=szip-2.1.tar.gz && \
rm -fr ${BUILD}/szip* && \
#rm ${USER_COTS_PATH}/lib/*slibc*
install_the_source ${tar_name} && \
cd ${BUILD}/szip* && \
./configure --prefix=${USER_COTS_PATH} && \
make && \
make install && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_slibc()
{
echo ${FUNCNAME[0]}
tar_name=slibc-0.9.3.tar.gz && \
rm -fr ${BUILD}/slibc* && \
rm -fr ${USER_COTS_PATH}/lib/*slibc* && \
install_the_source ${tar_name} && \
cd ${BUILD}/slibc* && \
export PATH=${USER_COTS_PATH}/bin:${PATH} && \
cd src && \
cat stdio_s.c | sed "s#inline void get_s_cleanup#void get_s_cleanup#" > test.c && \
mv test.c stdio_s.c && \
cd .. && \
make && \
cp -r include/* ${USER_COTS_PATH}/include && \
cp src/libslibc.so.0.9.3 ${USER_COTS_PATH}/lib/ && \
cd ${USER_COTS_PATH}/lib && \
ln -s ./libslibc.so.0.9.3 libslibc.so && \
ln -s ./libslibc.so.0.9.3 libslibc++.so && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_sqlite()
{
echo ${FUNCNAME[0]}
tar_name=sqlite-autoconf-3330000.tar.gz && \
rm -fr ${BUILD}/SQ* && \
cd ${BUILD} && \
install_the_source ${tar_name} && \
cd ${BUILD}/sqlite* && \
./configure --prefix=${USER_COTS_PATH} --exec-prefix=${USER_COTS_PATH} --disable-tcl && \
make && \
make install && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
#liblapack.a
mk_lapack(){
echo ${FUNCNAME[0]}
tar_name=lapack-3.5.0.tgz && \
rm -fr ${BUILD}/lapack* && \
install_the_source $tar_name && \
cd ${BUILD}/lapack* && \
cp make.inc.example make.inc && \
echo "Building BLAS / LAPACK" && \
cd BLAS/SRC && \
export LD_RUN_PATH=${USER_COTS_PATH}/lib64:${USER_COTS_PATH}/lib && \
echo $LD_RUN_PATH && \
export FORTRAN=${FC} && \
export LOADER=${FC} && \
make OPTS=" -msse4a -O3 -fPIC -Wall -funderscoring " LD_RUN_PATH=${LD_RUN_PATH} FORTRAN="${FORTRAN} -funderscoring -g " LOADER="${LOADER}" && \
cd ../.. && \
make OPTS=" -msse4a -fPIC -Wall " LD_RUN_PATH=${LD_RUN_PATH} FORTRAN="${FORTRAN} -fimplicit-none -funderscoring -g" LOADER="${LOADER} -g" && \
cp librefblas.a libblas.a && \
cp *.a ${USER_COTS_PATH}/lib && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_gtest()
{
echo ${FUNCNAME[0]}
tar_name=gtest-1.7.0.zip && \
rm -fr ${BUILD}/gtest* && \
cd ${BUILD} && \
install_the_source ${tar_name} && \
cd ${BUILD}/gtest* && \
./configure --prefix=${USER_COTS_PATH} && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_proto()
{
echo ${FUNCNAME[0]}
tar_name=protobuf-3.8.x.zip && \
rm -fr ${BUILD}/protobuf* && \
rm -fr ${USER_COTS_PATH}//google/protobuf && \
rm -fr ${USER_COTS_PATH}/lib/*proto* && \
rm -fr ${USER_COTS_PATH}/lib/*proto* && \
cd ${BUILD} && \
install_the_source ${tar_name} && \
cd ${BUILD}/protobuf* && \
echo ${USER_COTS_PATH} && \
libtoolize --force && \
./autogen.sh --prefix=${USER_COTS_PATH} && \
./configure --prefix=${USER_COTS_PATH} && \
make && \
make install && \
LIB=${BUILD}/protobuf-3.8/lib && \
echo "Now java part" && \
cd ${BUILD}/protobuf*/java && \
export LD_LIBRARY_PATH=${USER_COTS_PATH}/lib && \
export LD_RUN_PATH=${USER_COTS_PATH}/lib && \
${USER_COTS_PATH}/bin/protoc --java_out=core/src/main/java -I../src ../src/google/protobuf/descriptor.proto && \
cd ${BUILD}/protobuf* && \
cd java/core/src/main/java/com/google/protobuf && \
javac *.java && \
cd ${BUILD}/protobuf* && \
cd java/core/src/main/java && \
jar cf ${USER_COTS_PATH}/lib/protobuf-java-3.8.0.jar com/google/protobuf/*.class && \
echo "mk_proto complete"
}
mk_fftw() {
echo ${FUNCNAME[0]}
tar_name=fftw-3.3.4.tar.gz && \
install_the_source $tar_name && \
cd ${BUILD}/fftw* && \
CFLAGS=-msse4a ./configure --with-gcc-arch=pentium4 --enable-shared=yes --enable-static=yes --enable-portable-binary --prefix=${USER_COTS_PATH} && \
make && \
make install
}
mk_slatec4 ()
{
echo ${FUNCNAME[0]}
tar_name=slatec.tar.gz && \
install_the_source $tar_name && \
cd ${BUILD}/slatec/src && \
make CXXFLAGS=" -msse4a -funderscoring -O3 -fPIC -Wall -Wno-unknown-pragmas " && \
mv static/libslatec.a ${USER_COTS_PATH}/lib
}
mk_pppack() {
echo ${FUNCNAME[0]}
tar_name=pppack.tar.gz && \
rm -fr ${BUILD}/pppack* && \
install_the_source ${tar_name} && \
# this must use underscores
cd ${BUILD}/PPPack && \
echo "Building pppack" && \
export F77_COMPILER="${FC}" && \
export F90_COMPILER="${FC}" && \
export F95_COMPILER="${FC}" && \
export CPP_COMPILER="${FC}" && \
make FCompile_Optn=" -m64 -fPIC -ffree-form -fimplicit-none -funderscoring" F77Compile_Optn=" -m64 -fPIC -ffixed-form -fimplicit-none -funderscoring -x f77" F77_FLAGS="-m64 -fPIC -ffixed-form -funderscoring -x f77" && \
mv libpppack.a ${USER_COTS_PATH}/lib
}
mk_cminpak(){
echo ${FUNCNAME[0]}
tar_name=cminpack-1.3.6.zip && \
cd ${BUILD} && \
rm -fr ${BUILD}/cminpack-1.3.6 && \
unzip ${ADL_COTS}/$tar_name && \
cd ${BUILD}/cminpack-1.3.6 && \
make -f Makefile && \
cp cminpack.h ${USER_COTS_PATH}/include && \
cp libcminpack.a ${USER_COTS_PATH}/lib && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
mk_open_ssl()
{
echo ${FUNCNAME[0]}
tar_name=openssl-1.0.2a.tar.gz && \
rm -fr ${BUILD}/openssl* && \
install_the_source ${tar_name} && \
cd ${BUILD}/open* && \
./config --openssldir=${BUILD} --prefix=${USER_COTS_PATH} && \
make && \
make test && \
make install
}
where()
{
cd ${BUILD}
mkdir where
cd where
rm *.o
cp ${ADL_COTS}/getday.c .
cp ${ADL_COTS}/gettim.c .
cp ${ADL_COTS}/where.f .
gfortran where.f gettim.c getday.c -o where
cp where ${USER_COTS_PATH}/bin
}
wipe()
{
rm -fr ${BUILD}
rm -fr ${USER_COTS_PATH}
mkdir -p ${BUILD}
mkdir -p ${USER_COTS_PATH}
mkdir -p ${USER_COTS_PATH}/lib64
mkdir -p ${USER_COTS_PATH}/bin/
mkdir -p ${USER_COTS_PATH}/include
}
for_container()
{
echo ${FUNCNAME[0]}
MYLIBS=/usr/lib64/
#echo "ls ${MYLIBS}"
#ls ${MYLIBS}
#find / -iname libgfortran.*
rm ${USER_COTS_PATH}/lib/libgfortran.*
rm ${USER_COTS_PATH}/lib/libquadmath.*
rm ${USER_COTS_PATH}/lib/libgcc*
rm ${USER_COTS_PATH}/lib/libstdc++*
rm ${USER_COTS_PATH}/lib64/libgfortran.*
rm ${USER_COTS_PATH}/lib64/libquadmath.*
rm ${USER_COTS_PATH}/lib64/libgcc*
rm ${USER_COTS_PATH}/lib64/libstdc++*
cp --preserve=links ${MYLIBS}/libgfortran.* ${USER_COTS_PATH}/lib64
cp --preserve=links ${MYLIBS}/libquadmath.* ${USER_COTS_PATH}/lib64
cp --preserve=links ${MYLIBS}/libgcc* ${USER_COTS_PATH}/lib64
cp --preserve=links ${MYLIBS}/libstdc++* ${USER_COTS_PATH}/lib64
cmd="ls -al ${USER_COTS_PATH}/lib64"
echo $cmd
$cmd
}
fix_links()
{
cd ${USER_COTS_PATH}/bin && \
rm -f bzcmp && \
ln -s ./bzcmp bzdiff && \
rm -f bzegrep && \
ln -s ./bzegrep bzgrep && \
rm -f bzfgrep && \
ln -s ./bzfgrep bzgrep && \
rm -f bzless && \
ln -s ./bzless bzmore && \
echo "${FUNCNAME[0]} finished" && \
return 0
}
all()
{
#echo_vars
chk_installed
for_container && \
mk_xerces && \
exit && \
mk_png && \
mk_zlib && \
mk_bz2 && \
mk_boost && \
mk_wgrib2 && \
mk_szip && \
mk_hdf5 && \
mk_log4cplus && \
mk_slibc && \
mk_sqlite && \
mk_fftw && \
mk_slatec4 && \
mk_lapack && \
mk_pppack && \
mk_libtool && \
mk_cminpak && \
mk_proto && \
fix_links && \
chk_installed && \
where && \
echo "COTS Built"
}
wipe
all