diff --git a/aosstower/level_b1/__init__.py b/aosstower/level_b1/__init__.py
deleted file mode 100644
index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..0000000000000000000000000000000000000000
diff --git a/aosstower/level_b1/daily/autoRun.bash b/aosstower/level_b1/autoRun.bash
similarity index 100%
rename from aosstower/level_b1/daily/autoRun.bash
rename to aosstower/level_b1/autoRun.bash
diff --git a/aosstower/level_b1/daily/avg_database.py b/aosstower/level_b1/avg_database.py
similarity index 100%
rename from aosstower/level_b1/daily/avg_database.py
rename to aosstower/level_b1/avg_database.py
diff --git a/aosstower/level_b1/daily/calc.py b/aosstower/level_b1/calc.py
similarity index 100%
rename from aosstower/level_b1/daily/calc.py
rename to aosstower/level_b1/calc.py
diff --git a/aosstower/level_b1/daily/__init__.py b/aosstower/level_b1/daily/__init__.py
deleted file mode 100644
index 8b137891791fe96927ad78e64b0aad7bded08bdc..0000000000000000000000000000000000000000
--- a/aosstower/level_b1/daily/__init__.py
+++ /dev/null
@@ -1 +0,0 @@
-
diff --git a/aosstower/level_b1/daily/foo.txt b/aosstower/level_b1/daily/foo.txt
deleted file mode 100644
index c2bf21f25a1811e6a816954575fa1beab89a6ee3..0000000000000000000000000000000000000000
--- a/aosstower/level_b1/daily/foo.txt
+++ /dev/null
@@ -1,163 +0,0 @@
-time
-lon
-station_name
-lat
-base_time
-time_offset
-alt
-rh_shield_freq_mean
-qc_rh_shield_freq_mean
-paro_cal_sig_low
-qc_paro_cal_sig_low
-air_temp_4_low
-qc_air_temp_4_low
-paro_air_temp_period_low
-qc_paro_air_temp_period_low
-air_temp_3_high
-qc_air_temp_3_high
-air_temp_2_low
-qc_air_temp_2_low
-pressure_mean
-qc_pressure_mean
-rh_mean
-qc_rh_mean
-rtd_shield_freq_mean
-qc_rtd_shield_freq_mean
-box_rh_high
-qc_box_rh_high
-box_air_temp_high
-qc_box_air_temp_high
-paro_air_temp_high
-qc_paro_air_temp_high
-air_temp_5_mean
-qc_air_temp_5_mean
-box_air_temp_low
-qc_box_air_temp_low
-precip_mean
-qc_precip_mean
-rh_shield_freq_high
-qc_rh_shield_freq_high
-rh_low
-qc_rh_low
-box_presure_high
-qc_box_presure_high
-paro_cal_sig_mean
-qc_paro_cal_sig_mean
-dewpoint_mean
-qc_dewpoint_mean
-paro_cal_sig_high
-qc_paro_cal_sig_high
-dewpoint_high
-qc_dewpoint_high
-paro_air_temp_period_mean
-qc_paro_air_temp_period_mean
-box_temp_low
-qc_box_temp_low
-altimeter_low
-qc_altimeter_low
-precip_low
-qc_precip_low
-rh_shield_freq_low
-qc_rh_shield_freq_low
-paro_air_temp_period_high
-qc_paro_air_temp_period_high
-wind_speed_low
-qc_wind_speed_low
-paro_pressure_period_low
-qc_paro_pressure_period_low
-paro_air_temp_low
-qc_paro_air_temp_low
-box_rh_low
-qc_box_rh_low
-air_temp_4_mean
-qc_air_temp_4_mean
-air_temp_6_3m_high
-qc_air_temp_6_3m_high
-gust_high
-qc_gust_high
-air_temp_5_low
-qc_air_temp_5_low
-wind_dir_high
-qc_wind_dir_high
-box_presure_low
-qc_box_presure_low
-pressure_low
-qc_pressure_low
-rh_high
-qc_rh_high
-rtd_shield_freq_low
-qc_rtd_shield_freq_low
-wind_speed_mean
-qc_wind_speed_mean
-air_temp_high
-qc_air_temp_high
-precip_high
-qc_precip_high
-accum_precip_high
-qc_accum_precip_high
-solar_flux_high
-qc_solar_flux_high
-paro_pressure_period_mean
-qc_paro_pressure_period_mean
-air_temp_4_high
-qc_air_temp_4_high
-peak_wind
-qc_peak_wind
-gust_low
-qc_gust_low
-rtd_shield_freq_high
-qc_rtd_shield_freq_high
-wind_dir_mean
-qc_wind_dir_mean
-box_temp_high
-qc_box_temp_high
-accum_precip_low
-qc_accum_precip_low
-pressure_high
-qc_pressure_high
-air_temp_6_3m_low
-qc_air_temp_6_3m_low
-wind_dir_low
-qc_wind_dir_low
-air_temp_3_low
-qc_air_temp_3_low
-air_temp_mean
-qc_air_temp_mean
-altimeter_mean
-qc_altimeter_mean
-air_temp_2_high
-qc_air_temp_2_high
-altimeter_high
-qc_altimeter_high
-box_presure_mean
-qc_box_presure_mean
-air_temp_low
-qc_air_temp_low
-box_air_temp_mean
-qc_box_air_temp_mean
-box_temp_mean
-qc_box_temp_mean
-paro_air_temp_mean
-qc_paro_air_temp_mean
-solar_flux_low
-qc_solar_flux_low
-wind_speed_high
-qc_wind_speed_high
-air_temp_2_mean
-qc_air_temp_2_mean
-accum_precip_mean
-qc_accum_precip_mean
-dewpoint_low
-qc_dewpoint_low
-box_rh_mean
-qc_box_rh_mean
-air_temp_3_mean
-qc_air_temp_3_mean
-solar_flux_mean
-qc_solar_flux_mean
-paro_pressure_period_high
-qc_paro_pressure_period_high
-air_temp_6_3m_mean
-qc_air_temp_6_3m_mean
-air_temp_5_high
-qc_air_temp_5_high
diff --git a/aosstower/level_b1/monthly/nc_monthly.py b/aosstower/level_b1/monthly/nc_monthly.py
deleted file mode 100644
index b94edf2ed3dc90bc231e2ead1ef7985a64ec20b1..0000000000000000000000000000000000000000
--- a/aosstower/level_b1/monthly/nc_monthly.py
+++ /dev/null
@@ -1,993 +0,0 @@
-import platform
-from netCDF4 import Dataset
-from aosstower.l00 import parser
-import calendar
-import logging
-from aosstower.level_b1.daily import nc
-from datetime import datetime as dt
-from collections import OrderedDict
-import glob
-import os
-
-# CF Metadata 1.6 compliant structure for NetCDF file. This is essentially
-# a pythonified version of the CDL
-BASIC_STATION = {
-
- 'globals': {
- 'source': 'surface observation',
- 'institution': 'UW SSEC',
- 'featureType': 'timeSeries',
- 'Conventions': 'ARM-1.2 CF-1.6',
- 'data_level': 'b1',
- 'datastream' : 'aoss.tower.nc-1mo-1d.lb1.v00',
- 'software_version': '00'
- },
-
- 'dimensions': {
- 'max_len_station_name': 32,
- 'time': None # Unlimited
- },
-
- 'variables': OrderedDict({
- 'base_time': {
- 'string': '', # Filled in by creator
- 'standard_name': 'time',
- 'long_name': 'base time as unix timestamp',
- 'units': 'seconds since 1970-01-01 00:00:00 0:00',
- '_type': 'd',
- '_shape': tuple(),
- },
- 'time_offset': {
- 'long_name': 'time offset from base_time',
- 'standard_name': 'time',
- 'units': '', # Filled in by creator
- '_type': 'd',
- '_shape': ('time',),
- },
- 'time': {
- 'long_name': 'time offset from epoch',
- 'standard_name': 'time',
- 'units': 'seconds since 1970-01-01 00:00:00 0:00',
- '_type': 'd',
- '_shape': ('time',),
- },
- 'station_name': {
- 'cf_role': 'timeseries_id',
- 'long_name': 'station name',
- '_type': 'S1',
- '_shape': ('max_len_station_name',),
- },
- 'lat': {
- 'standard_name': 'latitude',
- 'units': 'degrees_north',
- 'valid_min': -90,
- 'valid_max': 90,
- '_type': 'f',
- '_shape': tuple(),
- },
- 'lon': {
- 'standard_name': 'longitude',
- 'units': 'degrees_east',
- 'valid_min': -180,
- 'valid_max': 180,
- '_type': 'f',
- '_shape': tuple(),
- },
- 'alt': {
- 'long_name': 'vertical distance',
- 'standard_name': 'height',
- 'units': 'm',
- 'positive': 'up',
- 'axis': 'Z',
- '_type': 'f',
- '_shape': tuple(),
- }
- })
-}
-
-AOSS_VARS = OrderedDict({
- 'box_temp_high': {
- 'standard_name': 'air_temperature',
- 'units': 'degC',
- 'description': 'Auxillary Temperature',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_temp_low': {
- 'standard_name': 'air_temperature',
- 'units': 'degC',
- 'description': 'Auxillary Temperature',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_temp_mean': {
- 'standard_name': 'air_temperature',
- 'units': 'degC',
- 'description': 'Auxillary Temperature',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_presure_high': {
- 'standard_name': 'air_pressure',
- 'description': 'Pressure inside the data logger enclosure',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': '1100',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_presure_low': {
- 'standard_name': 'air_pressure',
- 'description': 'Pressure inside the data logger enclosure',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': '1100',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_presure_mean': {
- 'standard_name': 'air_pressure',
- 'description': 'Pressure inside the data logger enclosure',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': '1100',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_period_high': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_period_low': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_period_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_pressure_period_high': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_pressure_period_low': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_pressure_period_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_high': {
- 'standard_name': 'air_temperature',
- 'description': '',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_low': {
- 'standard_name': 'air_temperature',
- 'description': '',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_mean': {
- 'standard_name': 'air_temperature',
- 'description': '',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'pressure_high': {
- 'standard_name': 'air_pressure',
- 'description': 'Air pressure as measured from the PAROSCI pressure sensor',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': 1100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'pressure_low': {
- 'standard_name': 'air_pressure',
- 'description': 'Air pressure as measured from the PAROSCI pressure sensor',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': 1100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'pressure_mean': {
- 'standard_name': 'air_pressure',
- 'description': 'Air pressure as measured from the PAROSCI pressure sensor',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': 1100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_cal_sig_high': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_cal_sig_low': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_cal_sig_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_rh_high': {
- 'standard_name': 'relative humidity',
- 'description': 'Relative humidity inside the data logger enclosure',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_rh_low': {
- 'standard_name': 'relative humidity',
- 'description': 'Relative humidity inside the data logger enclosure',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_rh_mean': {
- 'standard_name': 'relative humidity',
- 'description': 'Relative humidity inside the data logger enclosure',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_air_temp_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature inside the data logger enclosure',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_air_temp_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature inside the data logger enclosure',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_air_temp_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature inside the data logger enclosure',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_2_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_2_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_2_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_3_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_3_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_3_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_4_high': {
- 'standard_name': 'air_temperature',
- 'description' : 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_4_low': {
- 'standard_name': 'air_temperature',
- 'description' : 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_4_mean': {
- 'standard_name': 'air_temperature',
- 'description' : 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_5_high': {
- 'standard_name': 'air_temperature',
- 'descripiton': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_5_low': {
- 'standard_name': 'air_temperature',
- 'descripiton': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
-},
-
- 'air_temp_5_mean': {
- 'standard_name': 'air_temperature',
- 'descripiton': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_speed_high': {
- 'standard_name': 'wind_speed',
- 'description': 'wind_speed',
- 'units': 'm*s^-1',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_speed_low': {
- 'standard_name': 'wind_speed',
- 'description': 'wind_speed',
- 'units': 'm*s^-1',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_speed_mean': {
- 'standard_name': 'wind_speed',
- 'description': 'wind_speed',
- 'units': 'm*s^-1',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_dir_high': {
- 'standard_name': 'wind_direction',
- 'description': 'wind_direction',
- 'units': 'degrees',
- 'valid_min': 0,
- 'valid_max': 360,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_dir_low': {
- 'standard_name': 'wind_direction',
- 'description': 'wind_direction',
- 'units': 'degrees',
- 'valid_min': 0,
- 'valid_max': 360,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_dir_mean': {
- 'standard_name': 'wind_direction',
- 'description': 'wind_direction',
- 'units': 'degrees',
- 'valid_min': 0,
- 'valid_max': 360,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_shield_freq_high': {
- 'standard_name': '',
- 'descrption' : '',
- 'units': 'hz',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_shield_freq_low': {
- 'standard_name': '',
- 'descrption' : '',
- 'units': 'hz',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_shield_freq_mean': {
- 'standard_name': '',
- 'descrption' : '',
- 'units': 'hz',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_high': {
- 'standard_name': 'relative_humidity',
- 'descripiton': 'Relative humidity',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_low': {
- 'standard_name': 'relative_humidity',
- 'descripiton': 'Relative humidity',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_mean': {
- 'standard_name': 'relative_humidity',
- 'descripiton': 'Relative humidity',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_6_3m_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature 6.3m from tower base',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_6_3m_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature 6.3m from tower base',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_6_3m_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature 6.3m from tower base',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'dewpoint_high': {
- 'standard_name': 'dewpoint_temperature',
- 'description': 'Calculated dewpoint temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'dewpoint_low': {
- 'standard_name': 'dewpoint_temperature',
- 'description': 'Calculated dewpoint temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'dewpoint_mean': {
- 'standard_name': 'dewpoint_temperature',
- 'description': 'Calculated dewpoint temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rtd_shield_freq_high': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rtd_shield_freq_low': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rtd_shield_freq_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'solar_flux_high': {
- 'standard_name': 'solar_flux',
- 'description': 'Solar flux',
- 'units': 'w*m^-2',
- 'valid_min': 0,
- 'valid_max': 3000,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'solar_flux_low': {
- 'standard_name': 'solar_flux',
- 'description': 'Solar flux',
- 'units': 'w*m^-2',
- 'valid_min': 0,
- 'valid_max': 3000,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'solar_flux_mean': {
- 'standard_name': 'solar_flux',
- 'description': 'Solar flux',
- 'units': 'w*m^-2',
- 'valid_min': 0,
- 'valid_max': 3000,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'precip_high': {
- 'standard_name': '',
- 'description': 'Precipitation',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'precip_low': {
- 'standard_name': '',
- 'description': 'Precipitation',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'precip_mean': {
- 'standard_name': '',
- 'description': 'Precipitation',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'accum_precip_high': {
- 'standard_name': 'axxumulated_precipitation',
- 'description': 'Precipitation accumulated since 0Z',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'accum_precip_low': {
- 'standard_name': 'axxumulated_precipitation',
- 'description': 'Precipitation accumulated since 0Z',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'accum_precip_mean': {
- 'standard_name': 'axxumulated_precipitation',
- 'description': 'Precipitation accumulated since 0Z',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'altimeter_high': {
- 'standard_name': '',
- 'description': '',
- 'units': 'inHg',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'altimeter_low': {
- 'standard_name': '',
- 'description': '',
- 'units': 'inHg',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'altimeter_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': 'inHg',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'gust_high':
- {
- 'standard_name': 'wind_speed_of_gust',
- 'descripiton': 'Wind gust over the previous 2 minutes',
- 'units': 'm/s',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'gust_low':
- {
- 'standard_name': 'wind_speed_of_gust',
- 'descripiton': 'Wind gust over the previous 2 minutes',
- 'units': 'm/s',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'peak_wind':
- {
- 'standard_name': 'wind_speed',
- 'description': 'fastest 5-second wind_speed',
- 'units': 'm/s',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- }
-})
-
-def _dt_convert(date):
- return dt.strptime(date, '%Y-%m-%d')
-
-def files_fr_directories(directories,file_ending='.ascii'):
- """gets a list of all raw data files in the given directories"""
- files = []
- for directory in directories:
- files += glob.glob(os.path.join(directory,'*%s'%file_ending))
- return files
-
-def createGiantNetCDF(start, end, directories, output, zlib, chunk_size):
- default = False
-
- if(chunk_size):
- chunksizes = [chunk_size]
-
- else:
- default = True
- inputFiles = files_fr_directories(directories)
-
- return False
-
- frame = getData(inputFiles)
-
- if(frame.empty):
- return False
-
- else:
-
- frame = minuteAverages(frame)
-
- if(start and end):
- frame = frame[start.strftime('%Y-%m-%d %H:%M:%S'): end.strftime('%Y-%m-%d %H:%M:%S')]
-
- if(default):
- chunksizes = [len(list(frame.index))]
-
- firstStamp = dt.strptime(str(list(frame.index)[0]), '%Y-%m-%d %H:%M:%S')
-
- ncFile = Dataset(outputName, 'w', format='NETCDF4_CLASSIC')
-
- ncFile = writeDimensions(ncFile)
-
- ncFile = createVariables(ncFile, firstStamp, chunksizes, zlib)
-
- ncFile.inputFiles = ', '.join(inputFiles)
-
- ncFile = writeVars(ncFile, frame)
-
- ncFile.close()
-
- return True
-
-def writeDimensions(ncFile):
- for name, size in BASIC_STATION['dimensions'].items():
- ncFile.createDimension(name, size)
-
- return ncFile
-
-def createVariables(ncFile, firstStamp, chunksizes, zlib):
- bts = firstStamp.strftime('%Y-%m-%d 00:00:00Z')
-
- tu = 'seconds since ' + firstStamp.strftime('%Y-%m-%d 00:00:00Z')
-
- for name, value in BASIC_STATION['globals'].items():
- setattr(ncFile, name, value)
-
- #generate history
- ncFile.history = ' '.join(platform.uname()) + " " + os.path.basename(__file__)
-
- for name, attrs in BASIC_STATION['variables'].items():
- shape = attrs['_shape']
- type_ = attrs['_type']
-
- if name == 'max_len_station_name':
- if (chunksizes) and chunksizes[0] > 32:
- variable = ncFile.createVariable(name, type_, shape, fill_value=-999, zlib=zlib, chunksizes=[32])
-
- else:
- variable = ncFile.createVariable(name, type_, shape, fill_value=-999, zlib=zlib, chunksizes=chunksizes)
-
- else:
- variable = ncFile.createVariable(name, type_, shape, fill_value=-999, zlib=zlib, chunksizes=chunksizes)
-
- if name == 'base_time':
- variable.string = bts
-
- if name == 'time':
- variable.units = tu
-
- for aname in attrs:
- if aname.startswith('_'):
- continue
-
- setattr(variable, aname, attrs[aname])
-
- for name, attrs in AOSS_VARS.items():
- shape = attrs['_shape']
- type_ = attrs['_type']
-
- variable = ncFile.createVariable(name, type_, shape, fill_value=-999, zlib=zlib, chunksizes=chunksizes)
-
- for aname in attrs:
- if aname.startswith('_'):
- continue
-
- setattr(variable, aname, attrs[aname])
-
- return ncFile
-
-
-def main():
- import argparse
-
- #argparse description
- parser = argparse.ArgumentParser(description="Convert level_00 aoss tower data to level_b1 monthly files")
-
- #argparse verbosity info
- parser.add_argument('-v', '--verbose', action="count", default=int(os.environ.get("VERBOSITY", 2)),
- dest='verbosity',
- help='each occurrence increases verbosity 1 level through ERROR-WARNING-INFO-DEBUG (default INFO)')
-
- #argparse start and end times
- parser.add_argument('-s', '--start-time', type=_dt_convert,
- help="Start time of massive netcdf file, if only -s is given, a netcdf file for only that month is given" +
- ". Formats allowed: \'YYYY-MM-DD\'")
- parser.add_argument('-e', '--end-time', type=_dt_convert, help='End time of massive netcdf file. Formats allowed:' +
- "\'YYYY-MM-DD\'")
- parser.add_argument('-cs', '--chunk-size', type=int, help='chunk Size for the netCDF file')
- parser.add_argument('-z', '--zlib', action='store_true', help='compress netCDF file with zlib')
-
- parser.add_argument("input_directories", nargs="+",
- help="aoss_tower level_00 paths")
-
- parser.add_argument('-o', '--output', required=True, nargs="+", help="filename pattern or filename. " +
- "Should be along the lines of <filepath>/aoss_tower.YYYY-MM-DD.nc")
- args = parser.parse_args()
-
- levels = [logging.ERROR, logging.WARN, logging.INFO, logging.DEBUG]
- level=levels[min(3, args.verbosity)]
- logging.basicConfig(level=level)
-
-
- if(args.start_time and args.end_time):
- result = createGiantNetCDF(args.start_time, args.end_time, args.input_directories, args.output[0], args.zlib, args.chunk_size)
- if(result == False):
- raise IOError('An empty ASCII file was found')
-
- elif(args.start_time):
- last_day = calendar.monthrange(args.start_time.year, args.start_time.month)[1]
- end_time = args.start_time.replace(day = last_day, hour=23, minute=59, second=59)
- result = createGiantNetCDF(args.start_time, end_time, args.input_directories, args.output[0], args.zlib, args.chunk_size)
- if(result == False):
- raise IOError('An empty ASCII file was found')
-
- elif(args.end_time):
- print('USAGE: start time must be specified when end time is specified')
-
- else:
- createMultiple(args.input_files, args.output, args.zlib, args.chunk_size)
-
-if __name__ == "__main__":
- main()
diff --git a/aosstower/level_b1/daily/nc.py b/aosstower/level_b1/nc.py
similarity index 100%
rename from aosstower/level_b1/daily/nc.py
rename to aosstower/level_b1/nc.py
diff --git a/aosstower/level_b1/daily/test_cases.txt b/aosstower/level_b1/test_cases.txt
similarity index 100%
rename from aosstower/level_b1/daily/test_cases.txt
rename to aosstower/level_b1/test_cases.txt