From c1f5d51eee1b18a509cd3c4ffa81072b86d10c1e Mon Sep 17 00:00:00 2001
From: Matthew Westphall <westphall@wisc.edu>
Date: Wed, 8 Feb 2017 22:06:51 +0000
Subject: [PATCH] updated netCDF4 datatypes to match ARM standard
---
aosstower/level_b1/avg_database.py | 838 -----------------------------
aosstower/level_b1/nc.py | 23 +-
2 files changed, 17 insertions(+), 844 deletions(-)
delete mode 100644 aosstower/level_b1/avg_database.py
diff --git a/aosstower/level_b1/avg_database.py b/aosstower/level_b1/avg_database.py
deleted file mode 100644
index 43b78fc..0000000
--- a/aosstower/level_b1/avg_database.py
+++ /dev/null
@@ -1,838 +0,0 @@
-# CF Metadata 1.6 compliant structure for NetCDF file. This is essentially
-# a pythonified version of the CDL
-from collections import OrderedDict
-import aosstower.schema as schema
-BASIC_STATION = {
-
- 'globals': {
- 'source': 'surface observation',
- 'institution': 'UW SSEC',
- 'featureType': 'timeSeries',
- 'Conventions': 'ARM-1.2 CF-1.6',
- 'data_level': 'b1',
- 'datastream' : 'aoss.tower.nc-1mo-1d.lb1.v00',
- 'software_version': '00'
- },
-
- 'dimensions': {
- 'max_len_station_name': 32,
- 'time': None # Unlimited
- },
-
- 'variables': OrderedDict({
- 'base_time': {
- 'string': '', # Filled in by creator
- 'standard_name': 'time',
- 'long_name': 'base time as unix timestamp',
- 'units': 'seconds since 1970-01-01 00:00:00 0:00',
- '_type': 'd',
- '_shape': tuple(),
- },
- 'time_offset': {
- 'long_name': 'time offset from base_time',
- 'standard_name': 'time',
- 'units': '', # Filled in by creator
- '_type': 'd',
- '_shape': ('time',),
- },
- 'time': {
- 'long_name': 'time offset from epoch',
- 'standard_name': 'time',
- 'units': 'seconds since 1970-01-01 00:00:00 0:00',
- '_type': 'd',
- '_shape': ('time',),
- },
- 'station_name': {
- 'cf_role': 'timeseries_id',
- 'long_name': 'station name',
- '_type': 'S1',
- '_shape': ('max_len_station_name',),
- },
- 'lat': {
- 'standard_name': 'latitude',
- 'units': 'degrees_north',
- 'valid_min': -90,
- 'valid_max': 90,
- '_type': 'f',
- '_shape': tuple(),
- },
- 'lon': {
- 'standard_name': 'longitude',
- 'units': 'degrees_east',
- 'valid_min': -180,
- 'valid_max': 180,
- '_type': 'f',
- '_shape': tuple(),
- },
- 'alt': {
- 'long_name': 'vertical distance',
- 'standard_name': 'height',
- 'units': 'm',
- 'positive': 'up',
- 'axis': 'Z',
- '_type': 'f',
- '_shape': tuple(),
- }
- })
-}
-
-AOSS_VARS = OrderedDict({
- 'box_temp_high': {
- 'standard_name': 'air_temperature',
- 'units': 'degC',
- 'description': 'Auxillary Temperature',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_temp_low': {
- 'standard_name': 'air_temperature',
- 'units': 'degC',
- 'description': 'Auxillary Temperature',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_temp_mean': {
- 'standard_name': 'air_temperature',
- 'units': 'degC',
- 'description': 'Auxillary Temperature',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_presure_high': {
- 'standard_name': 'air_pressure',
- 'description': 'Pressure inside the data logger enclosure',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': '1100',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_presure_low': {
- 'standard_name': 'air_pressure',
- 'description': 'Pressure inside the data logger enclosure',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': '1100',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_presure_mean': {
- 'standard_name': 'air_pressure',
- 'description': 'Pressure inside the data logger enclosure',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': '1100',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_period_high': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_period_low': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_period_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_pressure_period_high': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_pressure_period_low': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_pressure_period_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': '1',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_high': {
- 'standard_name': 'air_temperature',
- 'description': '',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_low': {
- 'standard_name': 'air_temperature',
- 'description': '',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_air_temp_mean': {
- 'standard_name': 'air_temperature',
- 'description': '',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'pressure_high': {
- 'standard_name': 'air_pressure',
- 'description': 'Air pressure as measured from the PAROSCI pressure sensor',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': 1100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'pressure_low': {
- 'standard_name': 'air_pressure',
- 'description': 'Air pressure as measured from the PAROSCI pressure sensor',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': 1100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'pressure_mean': {
- 'standard_name': 'air_pressure',
- 'description': 'Air pressure as measured from the PAROSCI pressure sensor',
- 'units': 'hpa',
- 'valid_min': 850,
- 'valid_max': 1100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_cal_sig_high': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_cal_sig_low': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'paro_cal_sig_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_rh_high': {
- 'standard_name': 'relative humidity',
- 'description': 'Relative humidity inside the data logger enclosure',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_rh_low': {
- 'standard_name': 'relative humidity',
- 'description': 'Relative humidity inside the data logger enclosure',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_rh_mean': {
- 'standard_name': 'relative humidity',
- 'description': 'Relative humidity inside the data logger enclosure',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_air_temp_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature inside the data logger enclosure',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_air_temp_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature inside the data logger enclosure',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'box_air_temp_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature inside the data logger enclosure',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_2_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_2_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_2_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_3_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_3_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_3_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_4_high': {
- 'standard_name': 'air_temperature',
- 'description' : 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_4_low': {
- 'standard_name': 'air_temperature',
- 'description' : 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_4_mean': {
- 'standard_name': 'air_temperature',
- 'description' : 'Auxillary air temperature',
- 'units' : 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_5_high': {
- 'standard_name': 'air_temperature',
- 'descripiton': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_5_low': {
- 'standard_name': 'air_temperature',
- 'descripiton': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
-},
-
- 'air_temp_5_mean': {
- 'standard_name': 'air_temperature',
- 'descripiton': 'Auxillary air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_speed_high': {
- 'standard_name': 'wind_speed',
- 'description': 'wind_speed',
- 'units': 'm*s^-1',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_speed_low': {
- 'standard_name': 'wind_speed',
- 'description': 'wind_speed',
- 'units': 'm*s^-1',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_speed_mean': {
- 'standard_name': 'wind_speed',
- 'description': 'wind_speed',
- 'units': 'm*s^-1',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_dir_high': {
- 'standard_name': 'wind_direction',
- 'description': 'wind_direction',
- 'units': 'degrees',
- 'valid_min': 0,
- 'valid_max': 360,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_dir_low': {
- 'standard_name': 'wind_direction',
- 'description': 'wind_direction',
- 'units': 'degrees',
- 'valid_min': 0,
- 'valid_max': 360,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'wind_dir_mean': {
- 'standard_name': 'wind_direction',
- 'description': 'wind_direction',
- 'units': 'degrees',
- 'valid_min': 0,
- 'valid_max': 360,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_shield_freq_high': {
- 'standard_name': '',
- 'descrption' : '',
- 'units': 'hz',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_shield_freq_low': {
- 'standard_name': '',
- 'descrption' : '',
- 'units': 'hz',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_shield_freq_mean': {
- 'standard_name': '',
- 'descrption' : '',
- 'units': 'hz',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_high': {
- 'standard_name': 'relative_humidity',
- 'descripiton': 'Relative humidity',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_low': {
- 'standard_name': 'relative_humidity',
- 'descripiton': 'Relative humidity',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rh_mean': {
- 'standard_name': 'relative_humidity',
- 'descripiton': 'Relative humidity',
- 'units': '%',
- 'valid_min': 0,
- 'valid_max': 100,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_6_3m_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature 6.3m from tower base',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_6_3m_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature 6.3m from tower base',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_6_3m_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature 6.3m from tower base',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'dewpoint_high': {
- 'standard_name': 'dewpoint_temperature',
- 'description': 'Calculated dewpoint temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'dewpoint_low': {
- 'standard_name': 'dewpoint_temperature',
- 'description': 'Calculated dewpoint temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'dewpoint_mean': {
- 'standard_name': 'dewpoint_temperature',
- 'description': 'Calculated dewpoint temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rtd_shield_freq_high': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rtd_shield_freq_low': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'rtd_shield_freq_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': '',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_high': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_low': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'air_temp_mean': {
- 'standard_name': 'air_temperature',
- 'description': 'Air temperature',
- 'units': 'degC',
- 'valid_min': -50,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'solar_flux_high': {
- 'standard_name': 'solar_flux',
- 'description': 'Solar flux',
- 'units': 'w*m^-2',
- 'valid_min': 0,
- 'valid_max': 3000,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'solar_flux_low': {
- 'standard_name': 'solar_flux',
- 'description': 'Solar flux',
- 'units': 'w*m^-2',
- 'valid_min': 0,
- 'valid_max': 3000,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'solar_flux_mean': {
- 'standard_name': 'solar_flux',
- 'description': 'Solar flux',
- 'units': 'w*m^-2',
- 'valid_min': 0,
- 'valid_max': 3000,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'precip_high': {
- 'standard_name': '',
- 'description': 'Precipitation',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'precip_low': {
- 'standard_name': '',
- 'description': 'Precipitation',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'precip_mean': {
- 'standard_name': '',
- 'description': 'Precipitation',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'accum_precip_high': {
- 'standard_name': 'axxumulated_precipitation',
- 'description': 'Precipitation accumulated since 0Z',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'accum_precip_low': {
- 'standard_name': 'axxumulated_precipitation',
- 'description': 'Precipitation accumulated since 0Z',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'accum_precip_mean': {
- 'standard_name': 'axxumulated_precipitation',
- 'description': 'Precipitation accumulated since 0Z',
- 'units': 'mm',
- 'valid_min': 0,
- 'valid_max': 254,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'altimeter_high': {
- 'standard_name': '',
- 'description': '',
- 'units': 'inHg',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'altimeter_low': {
- 'standard_name': '',
- 'description': '',
- 'units': 'inHg',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'altimeter_mean': {
- 'standard_name': '',
- 'description': '',
- 'units': 'inHg',
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'gust_high':
- {
- 'standard_name': 'wind_speed_of_gust',
- 'descripiton': 'Wind gust over the previous 2 minutes',
- 'units': 'm/s',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'gust_low':
- {
- 'standard_name': 'wind_speed_of_gust',
- 'descripiton': 'Wind gust over the previous 2 minutes',
- 'units': 'm/s',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- },
-
- 'peak_wind':
- {
- 'standard_name': 'wind_speed',
- 'description': 'fastest 5-second wind_speed',
- 'units': 'm/s',
- 'valid_min': 0,
- 'valid_max': 50,
- '_type': 'f',
- '_shape': ('time',),
- }
-})
-
-def make_Var_db(aoss_vars):
- var_dict = {}
- for key in aoss_vars:
- #there's a typo in some var names
- entry = aoss_vars[key]
- key = key.replace('presure','pressure')
- var_dict[key] = schema.Var(
- entry.get('_type','f'),
- entry.get('standard_name',''),
- key,
- entry.get('description',''),
- entry.get('units',''),
- entry.get('valid_min',''),
- entry.get('valid_max',''),
- )
- return var_dict
-AOSS_VARS = make_Var_db(AOSS_VARS)
diff --git a/aosstower/level_b1/nc.py b/aosstower/level_b1/nc.py
index 81a8146..7115e8c 100644
--- a/aosstower/level_b1/nc.py
+++ b/aosstower/level_b1/nc.py
@@ -4,7 +4,6 @@ import logging
import pandas as pd
from datetime import datetime as dt
from aosstower.l00 import parser
-import avg_database
from netCDF4 import Dataset
import numpy as np
import platform
@@ -14,6 +13,18 @@ import calc
LOG = logging.getLogger(__name__)
+
+#create the '_mean','_low','_high' file structure
+def make_mean_dict(source_dict):
+ dest_dict = {}
+ for key in source_dict:
+ dest_dict[key+'_high'] = source_dict[key]
+ dest_dict[key+'_mean'] = source_dict[key]
+ dest_dict[key+'_low'] = source_dict[key]
+ return dest_dict
+
+mean_database = make_mean_dict(parser.database)
+
def filterArray(array, valid_min, valid_max):
qcControl = []
@@ -67,8 +78,8 @@ def createVariables(ncFile, firstStamp, chunksizes, zlib, database=parser.databa
'lon': [np.float32, None, float(-999), '-180L', 'longitude', None, 'degrees_east', '180L', None],
'lat': [np.float32, None, float(-999), '-90L', 'latitude', None, 'degrees_north', '90L', None],
'alt': [np.float32, None, float(-999), None, 'height', 'vertical distance', 'm', None, None],
- 'base_time': [np.float32, None, float(-999), None, 'time', btln, btu, None, None],
- 'time_offset': [np.float32, 'time', float(-999), None, 'time', tln, tu, None, None],
+ 'base_time': [np.int32, None, float(-999), None, 'time', btln, btu, None, None],
+ 'time_offset': [np.float64, 'time', float(-999), None, 'time', tln, tu, None, None],
'station_name': ['c', 'max_len_station_name', '-', None, None, 'station name', None, None, 'timeseries_id'],
'time': [np.float32, 'time', float(-999), None, None, "Time offset from epoch", "seconds since 1970-01-01 00:00:00Z", None, None, None]
}
@@ -312,7 +323,7 @@ def writeVars(ncFile, frame, database=parser.database):
baseTimeValue = baseTimeValue.total_seconds()
#create time numpy
- timeNumpy = np.empty(len(stamps), dtype='float32')
+ timeNumpy = np.empty(len(stamps), dtype='float64')
counter = 0
@@ -328,7 +339,7 @@ def writeVars(ncFile, frame, database=parser.database):
fileVar = ncFile.variables
fileVar['base_time'].assignValue(baseTimeValue)
fileVar['time_offset'][:] = timeNumpy
- fileVar['time'][:] = timeNumpy + baseTimeValue
+ fileVar['time'][:] = timeNumpy
#write coordinate var values to file
#alt might not be right, need to verify
@@ -497,7 +508,7 @@ def main():
logging.basicConfig(level=level)
- database = avg_database.AOSS_VARS if args.interval else parser.database
+ database = mean_database if args.interval else parser.database
if(args.start_time and args.end_time):
result = createGiantNetCDF(args.start_time, args.end_time, args.input_files, args.output[0], args.zlib, args.chunk_size,
args.interval, database)
--
GitLab