from util import BaseCheckList, invalidate_records, annotate_all, update_variable_qc import pandas as pd import numpy as np def detector_check(frame, parameters): """ Check that the detector temp is in range """ if 'detectorTemp' not in frame.columns: return frame detector_temp_too_high = (frame['detectorTemp'] > 90) frame['detector_check'] = detector_temp_too_high * 1 frame['qc_detectorTemp'] = detector_temp_too_high * 1 annotate_all(frame, detector_temp_too_high, 'detector temperature too high') frame = invalidate_records(frame, 'detector_check') return frame def hbb_thermistor_check(frame, parameters): """ Check that all HBB thermistor temps are in range """ if not np.in1d(['HBBbottomTemp','HBBapexTemp','HBBtopTemp'], frame.columns).all(): return frame hbbb_too_low = (frame['HBBbottomTemp'] - 333) < -2 hbba_too_low = (frame['HBBapexTemp'] - 333) < -2 hbbt_too_low = (frame['HBBtopTemp'] - 333) < -2 hbbb_too_high = (frame['HBBbottomTemp'] - 333) > 2 hbba_too_high = (frame['HBBapexTemp'] - 333) > 2 hbbt_too_high = (frame['HBBtopTemp'] - 333) > 2 hbbb_problem = hbbb_too_low | hbbb_too_high hbba_problem = hbba_too_low | hbba_too_high hbbt_problem = hbbt_too_low | hbbt_too_high # Record qc for each thermistor # qc variables are probabilites between 0 and 1 variable_qcs = pd.DataFrame({ 'qc_HBBbottomTemp':hbbb_problem * 1, 'qc_HBBapexTemp' : hbba_problem * 1, 'qc_HBBtopTemp' : hbbt_problem * 1 }, index=frame.index) frame = update_variable_qc(frame, variable_qcs) # Compute overall BB quality frame['hbb_thermistor_check'] = (hbbb_problem | hbba_problem | hbbt_problem) * 1 annotate_all(frame, hbbb_too_low, 'HBB bottom temperature too low') annotate_all(frame, hbbt_too_low, 'HBB top temperature too low') annotate_all(frame, hbba_too_low, 'HBB apex temperature too low') annotate_all(frame, hbbb_too_high, 'HBB bottom temperature too high') annotate_all(frame, hbbt_too_high, 'HBB top temperature too high') annotate_all(frame, hbba_too_high, 'HBB apex temperature too high') frame = invalidate_records(frame, 'hbb_thermistor_check') return frame def hbb_stable_check(frame, parameters): return frame class CheckList(BaseCheckList): checks = [detector_check, hbb_thermistor_check, hbb_stable_check] #### TESTS #### def test_hbb_thermistor_check(): frame = hbb_thermistor_check(pd.DataFrame({ 'HBBbottomTemp':[300,333,336], 'HBBapexTemp':[300,333,336], 'HBBtopTemp':[300,333,336], 'sceneMirrorPosition':[ord('H'), ord('A'), ord('S')], 'qc_notes':'' }), {}) assert all(frame['hbb_thermistor_check'] == [1,0,1]) assert all('HBB {} temperature too low'.format(x) in frame.iloc[0].qc_notes.split(',') for x in ['bottom','apex','top']) assert all('HBB {} temperature too high'.format(x) in frame.iloc[2].qc_notes.split(',') for x in ['bottom','apex','top']) def test_hbb_thermistor_check2(): frame = hbb_thermistor_check(pd.DataFrame({ 'HBBbottomTemp':[300,333,333], 'HBBapexTemp':[300,333,333], 'HBBtopTemp':[300,333,333], 'sceneMirrorPosition':[ord('H'), ord('A'), ord('S')], 'qc_notes':'' }), {}) assert all(frame['hbb_thermistor_check'] == [1,0,1]) def test_detector_check(): frame = detector_check(pd.DataFrame({ 'detectorTemp':[50,100], 'sceneMirrorPosition':[ord('H'), ord('A')], 'qc_notes':'' }), {}) assert all(frame['detector_check'] == [0,1]) assert frame.iloc[1].qc_notes == 'detector temperature too high'