From 80145c98781f11aa3735059b1de85d227c30387b Mon Sep 17 00:00:00 2001
From: Coda Phillips <cphillips@sean.ssec.wisc.edu>
Date: Wed, 6 Jul 2016 11:07:01 -0500
Subject: [PATCH] Finish up the interpreter
---
interpret_qc.py | 56 ++++++++++++++++++++++++++++++++++++++++----
templates/index.html | 12 ++++++++++
templates/qc.html | 11 +++++++++
3 files changed, 75 insertions(+), 4 deletions(-)
create mode 100644 templates/index.html
create mode 100644 templates/qc.html
diff --git a/interpret_qc.py b/interpret_qc.py
index 11f6f2c..a181e3c 100644
--- a/interpret_qc.py
+++ b/interpret_qc.py
@@ -2,21 +2,64 @@ import netCDF4
import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
+import mpld3
from aeri_tools.io.dmv.housekeeping import get_all_housekeeping
from main import files_to_update
from glob import glob
import os
+import flask
+from flask import render_template
+from datetime import datetime
+
+app = flask.Flask(__name__)
+
+global_ftp_dir = None
+
+@app.route('/')
+def index():
+ ae_dirs = glob(os.path.join(global_ftp_dir, 'AE*/*.qc'))
+ ae_dirs = [a.lstrip('/') for a in ae_dirs]
+ return flask.render_template('index.html', ae_dirs=ae_dirs)
+
+@app.route('/qc/<path:qc_path>')
+def qc_day(qc_path):
+ qc_path = '/'+qc_path
+ cxs_path = qc_path.replace('.qc','B1.CXS')
+ sum_path = qc_path.replace('.qc','.SUM')
+
+ cxs = get_all_housekeeping(cxs_path)
+ frame = cxs.combine_first(get_all_housekeeping(sum_path))
+ frame = frame.combine_first(get_qc_frame(qc_path))
+
+ plots = []
+
+ for qc_variable in ([
+ 'ABBapexTemp',
+ 'ABBtopTemp',
+ 'ABBbottomTemp',
+ 'HBBapexTemp',
+ 'HBBtopTemp',
+ 'HBBbottomTemp',
+ 'calibrationAmbientTemp']):
+ plot = plot_variable_qc(frame, qc_variable)
+ if plot is not None:
+ plots.append(plot)
+
+ return flask.render_template('qc.html', qc_path=qc_path, plots=plots)
def save_plot(filename):
print('saving {}'.format(filename))
plt.savefig(filename, transparent=True)
-def plot_variable_qc(frame, loc, filename):
+def plot_variable_qc(frame, loc, filename=None):
qc_loc = 'qc_' + loc
if sum(frame[qc_loc]) > 0:
- plt.figure()
+ fig = plt.figure(figsize=(50,5))
plot_outliers(frame, frame[qc_loc] == 0, loc)
- save_plot(filename)
+ if filename is not None:
+ save_plot(filename)
+ else:
+ return mpld3.fig_to_html(fig)
def plot_outliers(frame, qc_mask, loc):
if (~qc_mask).any():
@@ -60,8 +103,13 @@ if __name__ == '__main__':
import argparse
parser = argparse.ArgumentParser()
parser.add_argument('ftp')
+ parser.add_argument('--serve', action='store_true')
args = parser.parse_args()
- generate_all_plots(args.ftp)
+ if not args.serve:
+ generate_all_plots(args.ftp)
+ else:
+ global_ftp_dir = args.ftp
+ app.run(debug=True)
diff --git a/templates/index.html b/templates/index.html
new file mode 100644
index 0000000..161aa81
--- /dev/null
+++ b/templates/index.html
@@ -0,0 +1,12 @@
+<!DOCTYPE html>
+<html>
+ <head>
+ </head>
+ <body>
+ <ul>
+ {% for d in ae_dirs %}
+ <a href="/qc/{{d}}"><li>/{{d}}</li></a>
+ {% endfor %}
+ </ul>
+ </body
+</html>
diff --git a/templates/qc.html b/templates/qc.html
new file mode 100644
index 0000000..78bd4e2
--- /dev/null
+++ b/templates/qc.html
@@ -0,0 +1,11 @@
+<!DOCTYPE html>
+<html>
+ <head>
+ </head>
+ <body>
+ <h1>{{qc_path}}</h1>
+ {% for plot in plots %}
+ {{plot|safe}}
+ {% endfor %}
+ </body
+</html>
--
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